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This is a bug, the JavaScript validator needs a few tweaks and refinements to it’s logic and they are planned. In the mean time, you can either ignore the warning or disable the JavaScript validator for the project or your workspace.
You can right-click on the file, and go down to MyEclipse > “Exclude from Validation” to exclude that one file from validation. If there are tons of errors on all your JS files you want to remove, you can edit your project properties and go to MyEclipse > Validation and turn off the JavaScript validator entirely if you prefer.
When I said I wanted to get rid of the javascript warning I did not mean I wanted to hid it. Is there anyway to let myelipse know to look in the other javascript file for the function definition?
My consern is that there could be javascript other warnings or errors that would be hidden if I turn off validation for the specific file or worse yet for all javascript files.